pyXenium.multimodal.compare_programs_with_embeddings

compare_programs_with_embeddings(program_scores, embeddings, *, id_column='contour_id', program_columns=None, embedding_columns=None, label_column=None)

Compare pyXenium interpretable program scores with external embeddings.

Parameters:

• program_scores (str | Path | DataFrame)

• embeddings (str | Path | DataFrame)

• id_column (str)

• program_columns (Sequence[str] | None)

• embedding_columns (Sequence[str] | None)

• label_column (str | None)

Return type:

dict[str, DataFrame | dict[str, Any]]