pyXenium.contour.smooth_density_by_distance

smooth_density_by_distance(sdata, *, contour_key, target='transcripts', contour_query=None, target_query=None, feature_key='gene_name', feature_values=None, inward, outward, bandwidth, grid_step=None)

Compute a continuous signed-distance density profile around contour annotations.

Parameters:

• sdata (XeniumSlide)

• contour_key (str)

• target (str)

• contour_query (str | None)

• target_query (str | None)

• feature_key (str)

• feature_values (str | Sequence[str] | None)

• inward (float)

• outward (float)

• bandwidth (float)

• grid_step (float | None)

Return type:

DataFrame